Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829459.1_cds_XP_016503762.1_17275
CDS Infomation

[gene=LOC107821815] [db_xref=GeneID:107821815] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016503762.1] [location=complement(join(3847..4334,4945..5149,5235..5417,5536..5640,5741..5984,6107..6252,6328..6418,6814..7018,7631..7850))] [gbkey=CDS]
Sequence

ATGGGGAGAATGTCAATACCCATGATGGGTTTTGTGGTGTTATGCCTATGGGCAGTGGTA
GCAGAAGGAGAATATGTGAAATACAAGGACCCAAAACAGCCAGTAGGAGCTAGAATTAAG
GATTTGATGAAAAGGATGACACTTGAGGAAAAGATTGGTCAGATGACTCAGATTGAGAGG
AAAGTTGCCACTGCTCATGTTATGAAGCAAAACTTCATTGGGAGTGTATTGAGTGGTGGA
GGAAGTGTCCCTGCACCTAAGGCCTCTGCTCAGGTTTGGACCAATATGGTAGATGAGATT
CAAAAGGGTTCTCTTTCGACCCGTCTTGGAATTCCCATGATTTATGGAATTGATGCAGTT
CATGGTCACAACAATGTCTATGGGGCTACAATCTTTCCTCACAATGTTGGGCTTGGTGTT
ACCAGGGATCCTGATCTTGTGAAGCGTATTGGGGCTGCAACTGCACTTGAAGTCAGAGCT
ACAGGAATTCCATATGCCTTTGCTCCCTGCATCGCAGTATGTAGAAATCCTAGATGGGGC
CGTTGTTATGAGAGTTACAGTGAAGATCATAGGATTGTGCGAAGCATGACAGAGATCATT
CCTGGCCTGCAAGGAGATTTGCCAGCTAAATCTAAGAATGGTGTTCCTTATGTTGGAGGA
AAGACTAAGGTTGCGGCCTGTGCTAAGCACTTTGTGGGAGATGGTGGCACGTTGCAGGGC
GTTGATGAAAGTAACACTGTAATCAGCTCAAACAGTTTATTTAGCATCCACATGCCTGCA
TATTATGACTCACTCAGAAAGGGTGTTGCAACGGTTATGGTGTCTTACTCAAGCTGGAAC
GGAAGAAAGATGCATGCCAACCGAGACCTCGTCACTGGCTTCCTGAAGGACAAACTCAAG
TTCAGGGGCTTCGTCATTTCAGATTGGCAAGGGCTTGACCGGATTACTGACCCACCTCAT
GCTAACTACTCTTATTCAGTTCAAGCTGGAATTATGGCAGGAATCGACATGATTATGGTC
CCCGAGAATTATAGAGAGTTTATCGATACTTTGACTTCTCAAGTGAAAGCCAATATCATT
CCCATGAGCAGAATTGATGATGCTGTGAAGCGGATACTGAGGGTTAAATTTGTTATGGGT
CTCTTCGAGAACCCAATGTCTGACCCTAGCTTGGCAAACCAACTAGGTAGCAAGGAGCAC
AGAGAATTAGCAAGGGAAGCAGTAAGGAAATCACTCGTACTCTTGAAGAATGGCAAAACG
CCTAGTCAGCCATTACTTCCCCTTCCAAAGAAAGCTCCAAAAATACTTGTTACTGGAACT
CATGCAGACAACTTGGGTTACCAATGTGGAGGCTGGACAATTGAATGGCAGGGTGTTGCT
GGCAACGATCTTACAGTCGGAACTACCATTCTAACTGCTATCAAGAAAACTGTTGATCCT
TCTACACAAGTAGTGTACCAGCAGAATCCTGATGCGAACTTCGTAAAGTCCAACAAATTC
TCCTATGCCATTGTGGTTGTGGGTGAAGTCCCATATGCAGAGATGTTTGGCGACAGCTCA
AATCTCACAATAGCTGAACCAGGTCCTAGCACCATCAGTAACGTTTGTGGAGCAGTGAAG
TGTGTTGTAGTCGTAGTCTCAGGTCGTCCAGTGGTTATGGAGCCTTACGTTTCAAAAATG
GATGCTCTCGTTGCTGCTTGGCTCCCTGGAACTGAAGGCCAAGGTGTTGCTGATGCTTTA
TTTGGTGACTATGGCTTCACTGGAAAACTTGCTCGCACTTGGTTCAAGAGAGTTGATCAG
CTTCCAATGAACTTTGACGATGCACACGTTGATCCCCTCTTTCCCTTTGGATTTGGCATC
ACAACCAAACCAGTGAATGGCTACTAG

Peptide Sequence

PEP ID

XP_016503762.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MGRMSIPMMGFVVLCLWAVVAEGEYVKYKDPKQPVGARIKDLMKRMTLEEKIGQMTQIER
KVATAHVMKQNFIGSVLSGGGSVPAPKASAQVWTNMVDEIQKGSLSTRLGIPMIYGIDAV
HGHNNVYGATIFPHNVGLGVTRDPDLVKRIGAATALEVRATGIPYAFAPCIAVCRNPRWG
RCYESYSEDHRIVRSMTEIIPGLQGDLPAKSKNGVPYVGGKTKVAACAKHFVGDGGTLQG
VDESNTVISSNSLFSIHMPAYYDSLRKGVATVMVSYSSWNGRKMHANRDLVTGFLKDKLK
FRGFVISDWQGLDRITDPPHANYSYSVQAGIMAGIDMIMVPENYREFIDTLTSQVKANII
PMSRIDDAVKRILRVKFVMGLFENPMSDPSLANQLGSKEHRELAREAVRKSLVLLKNGKT
PSQPLLPLPKKAPKILVTGTHADNLGYQCGGWTIEWQGVAGNDLTVGTTILTAIKKTVDP
STQVVYQQNPDANFVKSNKFSYAIVVVGEVPYAEMFGDSSNLTIAEPGPSTISNVCGAVK
CVVVVVSGRPVVMEPYVSKMDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKRVDQ
LPMNFDDAHVDPLFPFGFGITTKPVNGY

Transcript Sequence

Gene sequence data has not been registered.